Extension of OMOP vocabulary to include botanical natural products, phytoconstituents, synonyms, and spelling variations for pharmacovigilance in adverse event reporting systems. Vocabulary is available to download and use.
Github repository: https://github.com/dbmi-pitt/np-terminology-imports
- Taneja SB, Paine MF, Kane-Gill SL, Boyce RD. Extending the OMOP Standard Vocabulary to Include Botanical Natural Products. Poster presentation at the Observational Health Data Sciences and Informatics (OHDSI) Symposium; October 14-16, 2022. https://www.ohdsi.org/2022showcase-24/.
- Li X, Ndungu P, Taneja SB, Chapin MR, Egbert SB, Akenapalli K, Paine MF, Kane-Gill SL, Boyce RD. An evaluation of adverse drug reactions and outcomes attributed to kratom in the US Food and Drug Administration Adverse Event Reporting System (FAERS) from January 2004 through September 2021. Clin Transl Sci. 2023; 00: 1- 10. DOI: 10.1111/cts.13505
Funding: This work is funded by the National Institutes of Health National Center for Complementary and Integrative Health Grant U54 AT008909.