Information Extraction from Unstructured Text using Large Language Models for Natural Product-Drug Interactions
January 4, 2024
Pacific Symposium of Biocomputing 2024

Application of Semantic Knowledge Representation and Natural Language Processing to Identify Pharmacologic Mechanisms
November 7, 2023
Doctoral Consortium, International Semantic Web Conference 2023

Generating Mechanistic Hypotheses for Pharmacovigilance Signals using a Natural Products Knowledge Graph
April 13, 2023
Advances in Pharmacovigilance for Herbal Medicines Conference
Abstract (P18)

Extending the OMOP Standard Vocabulary to Include Botanical Natural Products
October 14, 2022
OHDSI Symposium
Report and Poster

Evaluation of Named Entity Recognition Systems to Improve Ontology Concept Annotation for Biomedical Knowledge Graphs
July 13, 2022
Intelligent Systems for Molecular Biology (ISMB) Bio-ontologies

Relation Extraction from Biomedical Literature on Pharmacokinetic Natural Product-Drug Interactions
March 22, 2022
AMIA Informatics Summit 2022
Abstract Poster

Knowledge Graph Framework to Generate Hypotheses for Natural Product-Drug Interactions
December 3, 2021
Pitt-CMU Medical Informatics Colloquium (PCMIC)
Recorded Talk

Designing potential extensions from G-SRS to ChEBI to identify natural product-drug interactions
July 25, 2021
Intelligent Systems for Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) 2021

Does clinical data capture modifiable midlife risk factors for Alzheimer’s disease?
July 26, 2021
Presented by Dr. C. Elizabeth Shaaban
In 2021 Alzheimer's Association International Conference

Introducing Information Retrieval for Biomedical Informatics Students
June 10, 2021
5th TeachingNLP workshop at NAACL 2021

Explaining natural product-drug interactions with biomedical knowledge graphs
April 16, 2021
Intelligent Systems Program AI Forum, University of Pittsburgh

Modeling Alzheimer’s Disease by Combining Knowledge Extracted from Biomedical Literature with Biomedical Ontologies
Presented by Dr. Scott A. Malec
March 23, 2021
AMIA Informatics Summit 2021

Thesis defense: Bayesian Networks for Diagnosing Childhood Malaria in Malawi
April 10, 2020
University of Pittsburgh

What do you think of vaping? Machine learning methods for Twitter Stance Detection
November 8, 2019
Intelligent Systems Program AI Forum, University of Pittsburgh

Using Bayesian networks to diagnose childhood illness in low- and middle-income countries: case of malaria in Malawi
August 22, 2019
DBMI Annual Training Program Retreat, University of Pittsburgh